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Computational Methods in Biomolecular Structures and Interaction Networks

(9 Jul - 3 Aug 2007)

 ...  Jointly organized with Genome Institute of Singapore

Organizing Committee ·  Confirmed Visitors · Overview · Activities · Membership Application

Schedule of Tutorials

Venue: IMS Auditorium

Monday, 9 Jul 2007

09:00am - 09:15am

Registration

09:15am - 09:30am

Opening Remarks

09:30am - 10:30am

Networks basics (Tutorial Lecture 1) (PPT)
Danail Bonchev, Virginia Commonwealth University, USA

10:30am - 11:00am

--- Coffee Break ---

11:00am - 12:00nn

Networks basics (Tutorial Lecture 2) (PPT)
Danail Bonchev, Virginia Commonwealth University, USA

12:00nn - 02:00pm

--- Lunch Break ---

02:00pm - 03:00pm

Probabilistic models of sampling and emergence of biological networks (Tutorial Lecture 1)
Vladimir Kuznetsov, Genome Institute of Singapore

03:00pm - 03:30pm

--- Coffee Break ---

Tuesday, 10 Jul 2007

09:15am - 09:30am

Registration

09:30am - 10:30am

General network patterns (Tutorial Lecture 3) (PPT)
Danail Bonchev, Virginia Commonwealth University, USA

10:30am - 11:00am

--- Coffee Break ---

11:00am - 12:00nn

General network patterns (Tutorial Lecture 4) (PPT)
Danail Bonchev, Virginia Commonwealth University, USA

12:00nn - 02:00pm

--- Lunch Break ---

02:00pm - 03:00pm

Probabilistic models of sampling and emergence of biological networks (Tutorial Lecture 2)
Vladimir Kuznetsov, Genome Institute of Singapore

03:00pm - 03:30pm

--- Coffee Break ---

Wednesday, 11 Jul 2007

09:15am - 09:30am

Registration

09:30am - 10:30am

Computer simulation of biological pathways and network crosstalk based on mass action laws (PPT) (Tutorial Lecture 1)
Yu Zong Chen, National University of Singapore

10:30am - 11:00am

--- Coffee Break ---

11:00am - 12:00nn

Computer simulation of biological pathways and network crosstalk based on mass action laws (PPT) (Tutorial Lecture 2)
Yu Zong Chen, National University of Singapore

12:00nn - 02:00pm

--- Lunch Break ---

02:00pm - 03:00pm

Building and using protein interaction networks: industry perspective (PPT) (Tutorial Lecture 1)
Andrej Bugrim, Genego, Inc., USA

03:00pm - 03:30pm

--- Coffee Break ---

Thursday, 12 Jul 2007

09:15am - 09:30am

Registration

09:30am - 10:30am

Elucidation of differential response networks from toxicogenomics data (PPT) (Tutorial Lecture 2)
Andrej Bugrim, Genego, Inc., USA

10:30am - 11:00am

--- Coffee Break ---

11:00am - 12:00nn

Protein scoring based on significance in biological networks (PPT)(Tutorial Lecture 3)
Andrej Bugrim, Genego, Inc., USA

12:00nn - 02:00pm

--- Lunch Break ---

02:00pm - 03:00pm

MetaTox: leveraging the power of systems biology for improving drug safety (PPT) (Tutorial Lecture 4)
Andrej Bugrim, Genego, Inc., USA

03:00pm - 03:30pm

--- Coffee Break ---

Friday, 13 Jul 2007

09:15am - 09:30am

Registration

09:30am - 10:30am

Increasing confidence of protein-protein interactomes (Tutorial Lecture 1) (PDF 1, PDF 2)
Limsoon Wong, National University of Singapore

10:30am - 11:00am

--- Coffee Break ---

11:00am - 12:00nn

Increasing confidence of protein-protein interactomes (Tutorial Lecture 2) (PDF 1, PDF 2)
Limsoon Wong, National University of Singapore

12:00nn - 02:00pm

--- Lunch Break ---

02:00pm - 03:00pm

Computational identification of the gene sets and pathways controlled by transcription factors on genome-scale (PPT) (Tutorial Lecture 3)
Vladimir Kuznetsov, Genome Institute of Singapore

03:00pm - 04:00pm

Discussions - Computational approaches and prediction of evolving molecular interconnection networks

04:00pm - 04:30pm

--- Coffee Break ---

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Organizing Committee ·  Confirmed Visitors · Overview · Activities · Membership Application