Institute for Mathematical Sciences Event Archive
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The Phylogenetic Network Workshop
(27 - 31 Jul 2015)
Venue: IMS Auditorium (27 - 29 Jul, 30 Jul afternoon, 31 Jul 2015)
Venue: Blk S17, #04-06, SR1, Department of Mathematics, NUS (30 Jul 2015 morning)
Jointly organized with Department of Mathematics, NUS
Organizing Committee · Visitors and Participants · Overview · Activities · Venue
Monday, 27 Jul 2015 |
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08:45am - 09:00am |
Registration |
09:00am - 09:15am |
Opening Remarks |
09:15am - 10:05am |
Studying phylogenetic networks via integer linear programming (ILP) (PDF) |
10:05am - 10:35am |
--- Group Photo & Coffee Break --- |
10:35am - 11:25am |
The evolution of the metazoan protein toolkit |
11:25am - 11:55am |
Information needed to infer phylogenetic networks (PDF) |
11:55am - 02:00pm |
--- Lunch Reception at IMS --- |
02:00pm - 02:50pm |
Statistical inference of reticulate evolutionary histories of species (PDF) |
02:50pm - 03:20pm |
Deciphering reticulate evolution using phylogenetic reconciliation (PDF) |
03:20pm - 03:50pm |
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03:50pm - 04:20pm |
Bridging the gap (PDF) |
04:20pm - 04:50pm |
Comparing phylogenetic networks by counting triangles (PDF) |
Tuesday, 28 Jul 2015 |
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08:45am - 09:00am |
Registration |
09:00am - 09:50am |
Apprehending life's complexity and its evolution with networks (PDF) |
09:50am - 10:20am |
Large-scale study of genetic exchange through bipartite graphs (PDF) |
10:20am - 10:40am |
--- Coffee Break --- |
10:40am - 11:30am |
The biology of phylogenetic networks (PDF) |
11:30am - 12:00nn |
Identification and study of composite genes in the environment |
12:00nn - 12:30pm |
Exploring environmental genetic diversity with similarity networks (PDF) |
12:30pm - 02:00pm |
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02:00pm - 02:50pm |
Sequence similarity networks, n-rooted fusion graphs and lego diagrams: new tools for understanding evolution (PDF) |
02:50pm - 03:20pm |
Cherry picking: a new characterization to quantify reticulation (PDF) |
03:20pm - 03:50pm |
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03:50pm - 04:20pm |
Exploring the phylogenetic network community (PDF) |
04:20pm - 05:30pm |
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07:00pm |
Dinner (Volunteer and self paid) |
Wednesday, 29 Jul 2015 |
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08:45am - 09:00am |
Registration |
09:00am - 09:50am |
Optimal trees and realizations from split networks (PDF) |
09:50am - 10:20am |
Kernelizations for the hybridization number problem on multiple nonbinary trees |
10:20am - 10:40am |
--- Coffee Break --- |
10:40am - 11:30am |
Applications of the probabilistic species-tree aware approach |
11:30am - 01:30pm |
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Thursday, 30 Jul 2015 |
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Venue : Blk S17, #04-06, SR1, Department of Mathematics, NUS |
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09:00am - 09:50am |
Counting phylogenetic networks (PDF) |
09:50am - 10:20am |
Reconstructing phylogenetic level-1 networks from nondense binet and trinet sets (PDF) |
10:20am - 10:40am |
--- Coffee Break --- |
10:40am - 11:30am |
Mathematical aspects of phylogenetic networks (PDF) |
11:30am - 12:00nn |
Algorithms for constructing hybridization networks from multiple gene trees (PDF) |
12:00nn - 12:30pm |
A randomized approximation algorithm for rSPR Distance (PDF) |
12:30pm - 02:00pm |
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Venue : IMS Auditorium |
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02:00pm - 02:50pm |
Algorithms for pedigrees comparison (PDF) |
02:50pm - 03:40pm |
Studying horizontal gene transfer via quartet based methods |
03:40pm - 04:00pm |
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04:00pm - 05:30pm |
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Friday, 31 Jul 2015 |
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08:45am - 09:00am |
Registration |
09:00am - 09:50am |
Phylogenetic networks with stable property (PDF) |
09:50am - 10:20am |
Diversity and evolution of secondary metabolite clusters in marine actinomycetes (PDF) |
10:20am - 10:40am |
--- Coffee Break --- |
10:40am - 11:30am |
Lateral gene transfer as a molecular clock (PDF) |
11:30am - 12:20pm |
A statistical framework to analyze complex metagenomic networks (PDF) |
12:20pm - 02:00pm |
--- Lunch --- |
02:00pm - 02:30pm |
Computing split systems from weighted quartets |
02:30pm - 03:20pm |
Phylogenetic networks and software |
03:20pm - 03:30pm |
Closing Remarks |
Organizing Committee · Visitors and Participants · Overview · Activities · Venue
